Nucleotide metabolism

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Headshot of Ted Chauvin, PhD · Associate Professor
Ted Chauvin
PhD · Associate Professor
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Don’t be intimidated by the word metabolism! Nucleotide metabolism is a very high-yield topic that will come up throughout your career as a physician. Will you be getting into all of the details with your patients? No, of course not. However, when your patient comes to you with a gout flareup, you may prescribe a drug that goes after nucleotide metabolism. You’ll need to understand these mechanisms. The reading is out of Lippincott Illustrated Reviews: Biochemistry, 8e, and a book you’ll see used by me and others quite often. It’s a very level-appropriate book. The link to the chapter is here.

Chapter 22: Nucleotide Metabolism. Lippincott® Illustrated Reviews: Biochemistry, 8e, Medical Education Health Library.pdf

Describe the biosynthesis of purine and pyrimidine bases 

  • Thymidylate synthase   

  • Dihydrofolate reductase (DHFR) 

  • Ribonucleotide reductase 

  • Adenosine deaminase 

  • Xanthine oxidase 

  • PRPP synthetase 

  • glutamine:phosphoribosylpyrophosphate amidotransferase (GPAT) 

  • UMP synthase 

  • Hypoxanthine-guanine phosphoribosyltransferase (HGPRT) 

  • Adenine phosphoribosyltransferase (APRT) 

  • Purine salvage pathway 

  • Pyrimidine and purine de novo synthesis 

 

Describe disease states associated with pyrimidine and purine biosynthesis and degradation 

  • Gout 

  • Lesch–Nyhan syndrome 

  • Orotic Aciduria 

  • ADA Deficiency—SCID 

 

Describe how inhibitors can interfere with critical steps of nucleotide synthesis and how this can be leveraged for the treatment of different diseases  

  • 5-flourouracil 

  • Methotrexate 

  • Allopurinol 

  • Azathioprine 

  • 6-Mercaptopurine 

  • Hydroxyurea 

Describe the biosynthesis of purine and pyrimidine bases

Osmosis video on Nucleotide Metabolism. This Osmosis video discusses both purine and pyrimidine metabolism at a good level. It also does discuss some of the pharmaceuticals that can be used to disrupt synthesis.

Describe disease states associated with pyrimidine and purine biosynthesis and degradation

There are four disease states that I want you to walk away from this session understanding. There are Osmosis videos for three of these:

Osmosis video on gout.

        • (There’s a cool case study video on gout and pseudogout—you don’t need to go into it for this session, but big picture, this is why metabolism is essential to understand.)

Osmosis video on Lesch-Nyhan syndrome.

Osmosis video on adenosine deaminase deficiency.

Describe how inhibitors can interfere with critical steps of nucleotide synthesis and how this can be leveraged for the treatment of different diseases

The reading and some of the videos touch on these molecules. All of them would be good to know. The majority of these will show up throughout the curriculum. This is not an entire list of drugs that interfere with nucleotide synthesis, but some of the more common ones.

Drug Target Use
5-fluorouracil
Thymidylate synthase
Cancer
Methotrexate
DHFR
Cancer, psoriasis, rheumatoid arthritis
Allopurinol
Xanthine oxidase
Gout
Azathioprine
Purine synthesis
Immunosuppressant
6-Mercaptopurine
Purine synthesis
Autoimmune, cancer, Chron’s disease
Hydroxyurea
Ribonucleotide reductase
Cancer